Rebuild for ntl 8.1.0.

Also:
- Future-proof the gap package names.

sagemath-ntl.patch

@@ -0,0 +1,65 @@
+NTL 8.x introduces a new class, NTL::WrappedPtr<T>.  Unfortunately, Cython
+does not add a namespace identifier to the name of the existing WrappedPtr
+class, generated from the patched files below, resulting in ambiguous
+references to that name.  This patch simply changes the name of the existing
+class to avoid the name collision.
+
+diff -up src/sage/libs/polybori/decl.pxd.orig src/sage/libs/polybori/decl.pxd
+--- src/sage/libs/polybori/decl.pxd.orig	2014-11-23 07:58:14.000000000 -0700
++++ src/sage/libs/polybori/decl.pxd	2015-01-13 20:00:00.000000000 -0700
+@@ -291,10 +291,10 @@ cdef extern from "pb_wrap.h":
+         int (* size)()
+         PBPolyEntry (* get "operator[]")(int)
+ 
+-    ctypedef struct PBFglmStrategy "WrappedPtr<FGLMStrategy>":
++    ctypedef struct PBFglmStrategy "WrappedPointer<FGLMStrategy>":
+         PBPolyVector (* main "operator->()->main")()
+ 
+-    PBFglmStrategy PBFglmStrategy_Constructor "WrappedPtr<FGLMStrategy>" \
++    PBFglmStrategy PBFglmStrategy_Constructor "WrappedPointer<FGLMStrategy>" \
+         (PBRing from_ring, PBRing to_ring, PBPolyVector vec)
+ 
+     cdef cppclass PBGBStrategy "GroebnerStrategy":
+@@ -349,7 +349,7 @@ cdef extern from "pb_wrap.h":
+         PBPolyVector (* faugereStepDense)(PBPolyVector v)
+         bint (* generators_leadingTerms_owns  "generators.leadingTerms.owns")(PBMonom term)
+ 
+-    PBGBStrategy PBGBStrategy_Constructor "WrappedPtr<GroebnerStrategy>" \
++    PBGBStrategy PBGBStrategy_Constructor "WrappedPointer<GroebnerStrategy>" \
+         (PBRing r)
+ 
+ 
+diff -up src/sage/libs/polybori/pb_wrap.h.orig src/sage/libs/polybori/pb_wrap.h
+--- src/sage/libs/polybori/pb_wrap.h.orig	2014-11-23 07:58:14.000000000 -0700
++++ src/sage/libs/polybori/pb_wrap.h	2015-01-13 20:00:00.000000000 -0700
+@@ -177,23 +177,23 @@ PyObject* preallocated_to_PyString(const
+ 
+ 
+ template <class Type>
+-class WrappedPtr:
++class WrappedPointer:
+   public boost::shared_ptr<Type> {
+-    typedef WrappedPtr self;
++    typedef WrappedPointer self;
+     typedef boost::shared_ptr<Type> base;
+ 
+  public:
+-    WrappedPtr(): base() {}
+-    WrappedPtr(const self& rhs): base(rhs) {}
++    WrappedPointer(): base() {}
++    WrappedPointer(const self& rhs): base(rhs) {}
+ 
+     template <class T1>
+-    WrappedPtr(const T1& arg): base(new Type(arg)) {}
++    WrappedPointer(const T1& arg): base(new Type(arg)) {}
+ 
+     template <class T1, class T2>
+-    WrappedPtr(const T1& arg1, const T2& arg2): base(new Type(arg1, arg2)) {}
++    WrappedPointer(const T1& arg1, const T2& arg2): base(new Type(arg1, arg2)) {}
+ 
+       template <class T1, class T2, class T3>
+-        WrappedPtr(const T1& arg1, const T2& arg2, const T3& arg3):
++        WrappedPointer(const T1& arg1, const T2& arg2, const T3& arg3):
+         base(new Type(arg1, arg2, arg3)) {}
+ 
+     operator Type&() { return base::operator*();}

sagemath.spec

@@ -39,7 +39,7 @@ Name:		sagemath
 Group:		Applications/Engineering
 Summary:	A free open-source mathematics software system
 Version:	6.4.1
-Release:	1%{?dist}
+Release:	2%{?dist}
 # The file ${SAGE_ROOT}/COPYING.txt is the upstream license breakdown file
 # Additionally, every $files section has a comment with the license name
 # before files with that license
@@ -139,6 +139,9 @@ Patch21:	%{name}-cryptominisat.patch
 # https://bugzilla.redhat.com/show_bug.cgi?id=974769
 Patch22:	%{name}-sympy.patch
 
+# Fix a name clash with NTL
+Patch23:	%{name}-ntl.patch
+
 BuildRequires:	4ti2
 BuildRequires:	atlas-devel
 BuildRequires:	cddlib-tools
@@ -159,10 +162,10 @@ BuildRequires:	flint-devel >= 2.3
 BuildRequires:	gmp-ecm-devel
 BuildRequires:	gap
 BuildRequires:	GAPDoc
-BuildRequires:	gap-character-tables
 BuildRequires:	gap-libs
-BuildRequires:	gap-sonata
+BuildRequires:	gap-pkg-ctbllib
-BuildRequires:	gap-table-of-marks
+BuildRequires:	gap-pkg-sonata
+BuildRequires:	gap-pkg-tomlib
 BuildRequires:	gc-devel
 BuildRequires:	gd-devel
 BuildRequires:	gfan
@@ -227,10 +230,10 @@ Requires:	ecl
 Requires:	firefox
 Requires:	gap
 Requires:	GAPDoc
-Requires:	gap-character-tables
 Requires:	gap-libs
-Requires:	gap-sonata
+Requires:	gap-pkg-ctbllib
-Requires:	gap-table-of-marks
+Requires:	gap-pkg-sonata
+Requires:	gap-pkg-tomlib
 Requires:	genus2reduction
 Requires:	gfan
 Requires:	gmp-ecm
@@ -601,6 +604,7 @@ popd
 
 %patch21
 %patch22
+%patch23
 
 sed -e 's|@@SAGE_ROOT@@|%{SAGE_ROOT}|' \
     -e 's|@@SAGE_DOC@@|%{SAGE_DOC}|' \
@@ -1305,6 +1309,10 @@ exit 0
 
 ########################################################################
 %changelog
+* Thu Jan 15 2015 Jerry James <loganjerry@gmail.com> - 6.4.1-2
+- Rebuild for ntl 8.1.0
+- Future-proof the gap package names
+
 * Wed Nov 26 2014 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 6.4.1-1
 - Update to sagemath 6.4.1 (#1095282)