mirror of
https://src.fedoraproject.org/rpms/sagemath.git
synced 2025-04-22 11:45:56 -04:00
Update to sagemath 6.1.1
This commit is contained in:
pcpa
parent
d0a2caf3af
commit
34b5d7d380
30 changed files with 570 additions and 1598 deletions
369
sagemath.spec
369
sagemath.spec
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@ -4,18 +4,12 @@
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# for quicker test with packages not yet in fedora
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%global packager_debug 0
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# for quicker fedora-review tests without downloading the main tarball
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%global download_tarball 0
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# not functional due to missing jar dependencies
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%global with_sage3d 0
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# use an workaround to match upstream sagemath patched sphinx
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%global with_sphinx_hack 1
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# sagemath works only with pexpect-2.0
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%global with_sage_pexpect 1
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# https://bugzilla.redhat.com/show_bug.cgi?id=909510
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%global have_lrcalc 1
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@ -46,14 +40,14 @@
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%global SAGE_TIMEOUT 60
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%global SAGE_TIMEOUT_LONG 180
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%global conway_polynomials_pkg conway_polynomials-0.4.p0
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%global conway_polynomials_pkg conway_polynomials-0.4
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%global elliptic_curves_pkg elliptic_curves-0.7
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%global flintqs_pkg flintqs-20070817.p8
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%global graphs_pkg graphs-20120404.p4
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%global pexpect_pkg pexpect-2.0.p5
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%global flintqs_pkg flintqs-20070817
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%global graphs_pkg graphs-20120404
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%global pexpect_pkg pexpect-2.0
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%global polytopes_db_pkg polytopes_db-20120220
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%global rubiks_pkg rubiks-20070912.p18
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%global sagenb_pkg sagenb-0.10.7.2
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%global rubiks_pkg rubiks-20070912
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%global sagenb_pkg sagenb-0.10.8.2
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%global sagetex_pkg sagetex-2.3.4
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%global SAGE_ROOT %{_libdir}/sagemath
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@ -61,24 +55,20 @@
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%global SAGE_SRC %{SAGE_ROOT}/src
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%global SAGE_DOC %{_docdir}/%{name}
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%global SAGE_SHARE %{_datadir}/sagemath
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%global SAGE_EXTCODE %{SAGE_SHARE}/ext
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%global SAGE_ETC %{SAGE_SHARE}/etc
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%global SAGE_PYTHONPATH %{SAGE_ROOT}/site-packages
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Name: sagemath
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Group: Applications/Engineering
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Summary: A free open-source mathematics software system
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Version: 5.13
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Version: 6.1.1
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Release: 1%{?dist}
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# The file ${SAGE_ROOT}/COPYING.txt is the upstream license breakdown file
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# Additionally, every $files section has a comment with the license name
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# before files with that license
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License: ASL 2.0 and BSD and GPL+ and GPLv2+ and LGPLv2+ and MIT and Public Domain
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URL: http://www.sagemath.org
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%if %{download_tarball}
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Source0: http://boxen.math.washington.edu/home/%{name}/sage-mirror/src/sage-%{version}.tar
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%else
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Source0: sage-%{version}.tar
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%endif
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Source0: http://boxen.math.washington.edu/home/%{name}/sage-mirror/src/sage-%{version}.tar.gz
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Source1: gprc.expect
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Source2: makecmds.sty
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# not installed by jmol package, use one in sagemath jmol spkg
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@ -356,7 +346,7 @@ Group: Applications/Engineering
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Requires: %{name} = %{version}-%{release}
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Requires: %{name}-data-conway_polynomials = %{version}-%{release}
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Requires: %{name}-data-elliptic_curves = %{version}-%{release}
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Requires: %{name}-data-extcode = %{version}-%{release}
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Requires: %{name}-data-etc = %{version}-%{release}
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Requires: %{name}-data-graphs = %{version}-%{release}
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Requires: %{name}-data-polytopes_db = %{version}-%{release}
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BuildArch: noarch
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@ -391,13 +381,14 @@ Includes two databases:
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* William Stein's database of interesting curves
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#------------------------------------------------------------------------
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%package data-extcode
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%package data-etc
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Summary: Extcode for Sagemath
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Group: Applications/Engineering
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Requires: %{name}-data = %{version}-%{release}
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Obsoletes: %{name}-data-extcode < %{version}
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BuildArch: noarch
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%description data-extcode
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%description data-etc
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Collection of scripts and interfaces to sagemath.
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#------------------------------------------------------------------------
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@ -555,71 +546,86 @@ computations, and plots from the Sage mathematics software suite
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%prep
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%setup -q -n sage-%{version}
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mkdir -p spkg/build
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pushd spkg/build
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for pkg in \
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%{conway_polynomials_pkg} \
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%{elliptic_curves_pkg} \
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extcode-%{version} \
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%{flintqs_pkg} \
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%{graphs_pkg} \
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%if %{with_sage_pexpect}
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%{pexpect_pkg} \
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%endif
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%{polytopes_db_pkg} \
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%{rubiks_pkg} \
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%{sagenb_pkg} \
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%{sagetex_pkg} \
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sage-%{version} \
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sage_scripts-%{version} \
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; do
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tar jxf ../standard/$pkg.spkg
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done
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# apply in spkgs that do not have patches already applied
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# or that actually have patches
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pushd %{flintqs_pkg}/src
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for diff in `ls ../patches/*.patch`; do
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patch -p1 < $diff
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done
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pushd build/pkgs/conway_polynomials
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tar jxf ../../../upstream/%{conway_polynomials_pkg}.tar.bz2
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mv %{conway_polynomials_pkg} src
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popd
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pushd %{sagenb_pkg}/src
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tar zxf %{sagenb_pkg}.tar.gz
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mv %{sagenb_pkg} sagenb
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pushd build/pkgs/elliptic_curves
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tar jxf ../../../upstream/%{elliptic_curves_pkg}.tar.bz2
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mv %{elliptic_curves_pkg} src
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popd
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%if %{with_sage_pexpect}
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pushd %{pexpect_pkg}/src
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for diff in `ls ../patches/*.patch ../patches/*.diff`; do
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pushd build/pkgs/flintqs
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tar jxf ../../../upstream/%{flintqs_pkg}.tar.bz2
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mv %{flintqs_pkg} src
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pushd src
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for diff in `ls ../patches/*.patch`; do
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patch -p1 < $diff
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done
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popd
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%endif
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pushd %{rubiks_pkg}
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cp patches/dietz-mcube-Makefile src/dietz/mcube/Makefile
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cp patches/dietz-solver-Makefile src/dietz/solver/Makefile
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cp patches/dietz-cu2-Makefile src/dietz/cu2/Makefile
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cp patches/reid-Makefile src/reid/Makefile
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popd
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pushd build/pkgs/graphs
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tar jxf ../../../upstream/%{graphs_pkg}.tar.bz2
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mv %{graphs_pkg} src
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popd
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pushd build/pkgs/pexpect
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tar jxf ../../../upstream/%{pexpect_pkg}.tar.bz2
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mv %{pexpect_pkg} src
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pushd src
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for diff in `ls ../patches/*.patch`; do
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patch -p1 < $diff
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done
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popd
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popd
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%patch0 -p1
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%patch1 -p1
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%patch2 -p1
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%patch3 -p1
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%patch4 -p1
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%patch5 -p1
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%patch6 -p1
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%patch7 -p1
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%patch8 -p1
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%patch9 -p1
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%patch10 -p1
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%patch11 -p1
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%patch12 -p1
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%patch13 -p1
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pushd build/pkgs/polytopes_db
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tar jxf ../../../upstream/%{polytopes_db_pkg}.tar.bz2
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mv %{polytopes_db_pkg} src
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popd
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pushd spkg/build/sage-%{version}
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pushd build/pkgs/rubiks
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tar jxf ../../../upstream/%{rubiks_pkg}.tar.bz2
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mv %{rubiks_pkg} src
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pushd src
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cp ../patches/dietz-mcube-Makefile dietz/mcube/Makefile
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cp ../patches/dietz-solver-Makefile dietz/solver/Makefile
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cp ../patches/dietz-cu2-Makefile dietz/cu2/Makefile
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cp ../patches/reid-Makefile reid/Makefile
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popd
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popd
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pushd build/pkgs/sagenb
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tar xf ../../../upstream/%{sagenb_pkg}.tar
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mv %{sagenb_pkg} src
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pushd src
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tar zxf %{sagenb_pkg}.tar.gz
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popd
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popd
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pushd build/pkgs/sagetex
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tar jxf ../../../upstream/%{sagetex_pkg}.tar.bz2
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mv %{sagetex_pkg} src
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popd
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%patch0
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%patch1
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%patch2
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%patch3
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%patch4
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%patch5
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%patch6
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%patch7
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%patch8
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%patch9
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%patch10
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%patch11
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%patch12
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%patch13
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pushd src
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mkdir -p doc/pt/a_tour_of_sage/
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cp -fa doc/en/a_tour_of_sage/*.png doc/pt/a_tour_of_sage/
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%patch14 -p1
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@ -627,58 +633,60 @@ cp -fa doc/en/a_tour_of_sage/*.png doc/pt/a_tour_of_sage/
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%patch16 -p1
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popd
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%patch17 -p1
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%patch18 -p1
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%patch19 -p1
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%patch17
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%patch18
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%patch19
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%patch20 -p1
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%patch21 -p1
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%patch20
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%patch21
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%if %{have_lrcalc}
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%patch22 -p1
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%patch22
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%endif
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# other coin-or packages are build requires or coin-or-Cbc
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%if %{have_coin_or_Cbc}
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%patch23 -p1
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%patch23
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%endif
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%patch24 -p1
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%patch24
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%if %{have_fes}
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%patch25 -p1
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%patch25
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%endif
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%patch26 -p1
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%patch27 -p1
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%patch28 -p1
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%patch26
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%patch27
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%patch28
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sed -e 's|@@SAGE_ROOT@@|%{SAGE_ROOT}|' \
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-e 's|@@SAGE_DOC@@|%{SAGE_DOC}|' \
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-i spkg/build/sage-%{version}/sage/env.py
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-i src/sage/env.py
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#------------------------------------------------------------------------
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# ensure proper/preferred libatlas is in linker path
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pushd spkg/build/sage-%{version}
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perl -pi -e 's|^(extra_link_args = ).*|$1\["-L%{_libdir}/atlas"\]|;' sage/misc/cython.py
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# some .c files are not (re)generated
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find . \( -name \*.pyx -o -name \*.pxd \) | xargs touch
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popd
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perl -pi -e 's|^(extra_link_args = ).*|$1\["-L%{_libdir}/atlas"\]|;' src/sage/misc/cython.py
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%if 0%{?fedora}
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perl -pi -e 's|return 'atlas'|return 'satlas'|;' src/sage/misc/cython.py
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%endif
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# some .c files are not (re)generated
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find src/sage \( -name \*.pyx -o -name \*.pxd \) | xargs touch
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# remove bundled jar files before build
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rm spkg/build/%{sagenb_pkg}/src/sagenb/sagenb/data/sage3d/lib/sage3d.jar
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rm build/pkgs/sagenb/src/%{sagenb_pkg}/sagenb/data/sage3d/lib/sage3d.jar
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# remove binary egg
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rm -r spkg/build/%{sagenb_pkg}/src/sagenb/sagenb.egg-info
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rm -r build/pkgs/sagenb/src/%{sagenb_pkg}/sagenb.egg-info
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########################################################################
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%build
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export CC=%{__cc}
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export CFLAGS="%{optflags}"
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export CXXFLAGS="%{optflags}"
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export SAGE_ROOT=%{buildroot}%{SAGE_ROOT}
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export SAGE_LOCAL=%{buildroot}%{SAGE_LOCAL}
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# Avoid buildroot in gcc command line (use _builddir instead)
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export SAGE_SRC="$PWD/spkg/build/sage-%{version}"
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export SAGE_SRC="$PWD/src"
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export SAGE_FORTRAN=%{_bindir}/gfortran
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export SAGE_FORTRAN_LIB=`gfortran --print-file-name=libgfortran.so`
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export DESTDIR=%{buildroot}
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@ -687,45 +695,44 @@ export DOT_SAGE=/tmp/sage$$
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mkdir -p $DOT_SAGE/tmp
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# match system packages as sagemath packages
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mkdir -p $SAGE_ROOT $SAGE_LOCAL #%{buildroot}%{SAGE_SRC}
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mkdir -p $SAGE_ROOT $SAGE_LOCAL
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ln -sf %{_libdir} $SAGE_LOCAL/lib
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ln -sf %{_includedir} $SAGE_LOCAL/include
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ln -sf %{_datadir} $SAGE_LOCAL/share
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#ln -sf $SAGE_SRC/sage %{buildroot}%{SAGE_SRC}/sage
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export PATH=%{buildroot}%{_bindir}:$PATH
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export PYTHONPATH=%{buildroot}%{python_sitearch}:$PYTHONPATH
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|
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#------------------------------------------------------------------------
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pushd spkg/build/sage-%{version}
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pushd c_lib
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# scons ignores most environment variables
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# and does not have soname support
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sed -e 's|@@includedir@@|%{_includedir}|g' \
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-e 's|@@libdir@@|%{_libdir}|g' \
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-e 's|@@optflags@@|%{optflags}|g' \
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-e 's|@@__global_ldflags@@|%{__global_ldflags}|g' \
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-i SConstruct
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CXX=g++ UNAME=Linux SAGE64=auto scons
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ln -s libcsage.so.0 libcsage.so
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popd
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pushd sage/libs/mpmath
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dos2unix ext_impl.pxd ext_libmp.pyx ext_main.pxd ext_main.pyx
|
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popd
|
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pushd src/c_lib
|
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# scons ignores most environment variables
|
||||
# and does not have soname support
|
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sed -e 's|@@includedir@@|%{_includedir}|g' \
|
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-e 's|@@libdir@@|%{_libdir}|g' \
|
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-e 's|@@optflags@@|%{optflags}|g' \
|
||||
-e 's|@@__global_ldflags@@|%{__global_ldflags}|g' \
|
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-i SConstruct
|
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CXX=g++ UNAME=Linux SAGE64=auto scons
|
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ln -s libcsage.so.0 libcsage.so
|
||||
popd
|
||||
pushd src/sage/libs/mpmath
|
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dos2unix ext_impl.pxd ext_libmp.pyx ext_main.pxd ext_main.pyx
|
||||
popd
|
||||
pushd src
|
||||
python ./setup.py build
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{sagenb_pkg}/src/sagenb
|
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pushd build/pkgs/sagenb/src/%{sagenb_pkg}
|
||||
python ./setup.py build
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{flintqs_pkg}/src
|
||||
pushd build/pkgs/flintqs/src
|
||||
make %{?_smpflags} CPP="g++ %{optflags} -fPIC"
|
||||
popd
|
||||
|
||||
pushd spkg/build/%{rubiks_pkg}/src
|
||||
pushd build/pkgs/rubiks/src
|
||||
make %{?_smp_mflags} CC="gcc -fPIC" CXX="g++ -fPIC" CFLAGS="%{optflags}" CXXFLAGS="%{optflags}"
|
||||
popd
|
||||
|
||||
|
|
@ -734,11 +741,12 @@ rm -fr $DOT_SAGE
|
|||
|
||||
########################################################################
|
||||
%install
|
||||
export CC=%{__cc}
|
||||
export SAGE_ROOT=%{buildroot}%{SAGE_ROOT}
|
||||
export SAGE_LOCAL=%{buildroot}%{SAGE_LOCAL}
|
||||
export SAGE_SRC=%{buildroot}%{SAGE_SRC}
|
||||
export SAGE_SHARE=%{buildroot}%{SAGE_SHARE}
|
||||
export SAGE_EXTCODE=%{buildroot}%{SAGE_EXTCODE}
|
||||
export SAGE_ETC=%{buildroot}%{SAGE_ETC}
|
||||
export SAGE_DOC=%{buildroot}%{SAGE_DOC}
|
||||
export SAGE_PYTHONPATH=%{buildroot}%{SAGE_PYTHONPATH}
|
||||
export LD_LIBRARY_PATH=%{buildroot}%{_libdir}:$LD_LIBRARY_PATH
|
||||
|
|
@ -755,13 +763,13 @@ mkdir -p %{buildroot}%{_libdir}
|
|||
mkdir -p $SAGE_PYTHONPATH
|
||||
rm -fr $SAGE_LOCAL/{include,lib,share,notebook}
|
||||
mkdir -p $SAGE_SHARE $SAGE_DOC $SAGE_LOCAL/bin $SAGE_SRC
|
||||
ln -sf $PWD/spkg/build/sage-%{version}/sage $SAGE_SRC/sage
|
||||
ln -sf $PWD/src/sage $SAGE_SRC/sage
|
||||
ln -sf %{_libdir} $SAGE_LOCAL/lib
|
||||
ln -sf %{_includedir} $SAGE_LOCAL/include
|
||||
ln -sf %{_datadir} $SAGE_LOCAL/share
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/sage-%{version}
|
||||
pushd src
|
||||
python setup.py install --root=%{buildroot}
|
||||
cp -fa c_lib/libcsage.so.0 %{buildroot}%{_libdir}
|
||||
ln -sf libcsage.so.0 %{buildroot}%{_libdir}/libcsage.so
|
||||
|
|
@ -771,7 +779,7 @@ pushd spkg/build/sage-%{version}
|
|||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{sagenb_pkg}/src/sagenb
|
||||
pushd build/pkgs/sagenb/src/%{sagenb_pkg}
|
||||
rm -f %{buildroot}%{python_sitearch}/sagenb/data/sage3d/sage3d
|
||||
python setup.py install --root=%{buildroot} --install-purelib=%{python_sitearch}
|
||||
install -p -m0755 %{SOURCE5} $SAGE_LOCAL/bin/testjava.sh
|
||||
|
|
@ -792,15 +800,13 @@ pushd spkg/build/%{sagenb_pkg}/src/sagenb
|
|||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
%if %{with_sage_pexpect}
|
||||
pushd spkg/build/%{pexpect_pkg}/src
|
||||
pushd build/pkgs/pexpect/src
|
||||
cp -fa {ANSI,FSM,pexpect,pxssh,screen}.py $SAGE_PYTHONPATH
|
||||
popd
|
||||
%endif
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
cp -fa COPYING.txt $SAGE_ROOT
|
||||
pushd spkg/build/sage_scripts-%{version}
|
||||
pushd src/bin
|
||||
mkdir -p $SAGE_LOCAL/bin
|
||||
cp -fa sage-* $SAGE_LOCAL/bin
|
||||
pushd $SAGE_LOCAL/bin
|
||||
|
|
@ -810,14 +816,14 @@ pushd spkg/build/sage_scripts-%{version}
|
|||
ln -sf %{_bindir}/gmp-ecm ecm
|
||||
popd
|
||||
popd
|
||||
install -p -m755 spkg/bin/sage $SAGE_LOCAL/bin
|
||||
install -p -m755 src/bin/sage $SAGE_LOCAL/bin
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{flintqs_pkg}/src
|
||||
pushd build/pkgs/flintqs/src
|
||||
cp -fa QuadraticSieve $SAGE_LOCAL/bin
|
||||
popd
|
||||
|
||||
pushd spkg/build/%{rubiks_pkg}/src
|
||||
pushd build/pkgs/rubiks/src
|
||||
cp -fa \
|
||||
reid/optimal \
|
||||
dietz/solver/cubex \
|
||||
|
|
@ -831,19 +837,25 @@ popd
|
|||
#------------------------------------------------------------------------
|
||||
pushd $SAGE_LOCAL/bin/
|
||||
for file in \
|
||||
sage-apply-ticket \
|
||||
sage-arch-env \
|
||||
sage-bdist \
|
||||
sage-build \
|
||||
sage-clone \
|
||||
sage-clone-source \
|
||||
sage-combinat \
|
||||
sage-crap \
|
||||
sage-dev \
|
||||
sage-download-file \
|
||||
sage-download-upstream \
|
||||
sage-env \
|
||||
sage-fix-pkg-checksums \
|
||||
sage-list-experimental \
|
||||
sage-list-optional \
|
||||
sage-list-packages \
|
||||
sage-list-standard \
|
||||
sage-location \
|
||||
sage-make_devel_packages \
|
||||
sage-omega \
|
||||
sage-open \
|
||||
sage-pkg \
|
||||
sage-pull \
|
||||
sage-push \
|
||||
|
|
@ -853,14 +865,15 @@ pushd $SAGE_LOCAL/bin/
|
|||
sage-rebaseall.sh \
|
||||
sage-rebase.bat \
|
||||
sage-rebase.sh \
|
||||
sage-rebase \
|
||||
sage-rsyncdist \
|
||||
sage-sdist \
|
||||
sage-spkg-install \
|
||||
sage-startuptime.py \
|
||||
sage-spkg \
|
||||
sage-starts \
|
||||
sage-sync-build.py \
|
||||
sage-test-import \
|
||||
sage-update \
|
||||
sage-update-build \
|
||||
sage-update-src \
|
||||
sage-update-version \
|
||||
sage-upgrade \
|
||||
spkg-install; do
|
||||
rm -f $file
|
||||
|
|
@ -868,60 +881,49 @@ pushd $SAGE_LOCAL/bin/
|
|||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{conway_polynomials_pkg}
|
||||
pushd build/pkgs/conway_polynomials
|
||||
%__python2 ./spkg-install
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{elliptic_curves_pkg}
|
||||
pushd build/pkgs/elliptic_curves
|
||||
%__python2 ./spkg-install
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/extcode-%{version}
|
||||
mkdir -p $SAGE_EXTCODE
|
||||
pushd src/ext
|
||||
mkdir -p $SAGE_ETC
|
||||
for dir in \
|
||||
gap \
|
||||
genus2reduction \
|
||||
gnuplot \
|
||||
images \
|
||||
kash \
|
||||
macaulay2 \
|
||||
magma \
|
||||
maple \
|
||||
matlab \
|
||||
mathematica \
|
||||
maxima \
|
||||
MuPAD \
|
||||
mwrank \
|
||||
octave \
|
||||
QEPCAD \
|
||||
scilab \
|
||||
singular \
|
||||
sobj; do
|
||||
COUNT=`find $dir -type f | wc -l `
|
||||
if [ $COUNT -gt 0 ]; then
|
||||
cp -far $dir $SAGE_EXTCODE
|
||||
cp -far $dir $SAGE_ETC
|
||||
fi
|
||||
cp -far pari $SAGE_EXTCODE
|
||||
cp -far pari $SAGE_ETC
|
||||
done
|
||||
cp -fa %{SOURCE1} $SAGE_EXTCODE/pari
|
||||
cp -fa %{SOURCE1} $SAGE_ETC
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{graphs_pkg}
|
||||
pushd build/pkgs/graphs
|
||||
mkdir -p $SAGE_SHARE/graphs
|
||||
cp -fa src/* $SAGE_SHARE/graphs
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{polytopes_db_pkg}
|
||||
pushd build/pkgs/polytopes_db
|
||||
mkdir -p $SAGE_SHARE/reflexive_polytopes
|
||||
cp -fa src/* $SAGE_SHARE/reflexive_polytopes
|
||||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
pushd spkg/build/%{sagetex_pkg}/src
|
||||
pushd build/pkgs/sagetex/src
|
||||
python setup.py install --root=%{buildroot} --install-purelib=%{python_sitearch}
|
||||
install -p -m 0644 -D %{SOURCE2} \
|
||||
%{buildroot}%{_datadir}/texmf/tex/generic/sagetex/makecmds.sty
|
||||
|
|
@ -945,7 +947,7 @@ export SAGE_TESTDIR=\$DOT_SAGE/tmp
|
|||
export SAGE_ROOT="$SAGE_ROOT"
|
||||
export SAGE_LOCAL="$SAGE_LOCAL"
|
||||
export SAGE_SHARE="$SAGE_SHARE"
|
||||
export SAGE_EXTCODE="$SAGE_EXTCODE"
|
||||
export SAGE_ETC="$SAGE_ETC"
|
||||
export SAGE_SRC="$SAGE_SRC"
|
||||
##export SAGE_DOC="$SAGE_DOC"
|
||||
module load 4ti2-%{_arch}
|
||||
|
|
@ -957,7 +959,11 @@ export PATH=$SAGE_LOCAL/bin:\$PATH
|
|||
export SINGULARPATH=%{_libdir}/Singular/LIB
|
||||
export SINGULAR_BIN_DIR=%{_libdir}/Singular
|
||||
##export PYTHONPATH="$SAGE_PYTHONPATH:\$SAGE_LOCAL/bin"
|
||||
%if 0%{?fedora}
|
||||
export SAGE_CBLAS=blas
|
||||
%else
|
||||
export SAGE_CBLAS=cblas
|
||||
%endif
|
||||
export SAGE_FORTRAN=%{_bindir}/gfortran
|
||||
export SAGE_FORTRAN_LIB=\`gfortran --print-file-name=libgfortran.so\`
|
||||
export SYMPOW_DIR="\$DOT_SAGE/sympow"
|
||||
|
|
@ -980,14 +986,9 @@ chmod +x %{buildroot}%{SAGE_LOCAL}/bin/sage3d
|
|||
|
||||
#------------------------------------------------------------------------
|
||||
# adjust cython interface:
|
||||
# o link with proper atlas
|
||||
# o install csage headers
|
||||
# o install .pxi and .pxd files
|
||||
pushd spkg/build/sage-%{version}
|
||||
# make atlas/blas available to compiled sources
|
||||
perl -pi -e \
|
||||
's|^(extra_link_args =).*|$1 ["-L%{_libdir}/atlas"]|;' \
|
||||
%{buildroot}%{python_sitearch}/sage/misc/cython.py
|
||||
pushd src
|
||||
# make csage headers available
|
||||
mkdir -p %{buildroot}%{_includedir}/csage
|
||||
cp -fa c_lib/include/* %{buildroot}%{_includedir}/csage
|
||||
|
|
@ -1000,12 +1001,10 @@ pushd spkg/build/sage-%{version}
|
|||
popd
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
%if %{with_sage_pexpect}
|
||||
cp -f $SAGE_PYTHONPATH/{ANSI,FSM,pexpect,pxssh,screen}.py %{buildroot}%{python_sitearch}
|
||||
%endif
|
||||
|
||||
# Build documentation, using %#{buildroot} environment
|
||||
pushd spkg/build/sage-%{version}/doc
|
||||
pushd src/doc
|
||||
export SAGE_DOC=`pwd`
|
||||
export PATH=%{buildroot}%{_bindir}:$SAGE_LOCAL/bin:$PATH
|
||||
export SINGULARPATH=%{_libdir}/Singular/LIB
|
||||
|
|
@ -1027,7 +1026,6 @@ pushd spkg/build/sage-%{version}/doc
|
|||
|
||||
# should not be required and encodes buildroot
|
||||
rm -fr $SAGE_DOC/output/doctrees
|
||||
sed -e 's|%{buildroot}||g' -i $SAGE_DOC/output/html/en/reference/sage/misc/hg.html
|
||||
popd
|
||||
|
||||
%if %{with_check}
|
||||
|
|
@ -1039,9 +1037,7 @@ install -p -m644 $DOT_SAGE/tmp/test.log $SAGE_DOC/test.log
|
|||
sed -i 's|%{buildroot}||g' $SAGE_DOC/test.log
|
||||
%endif
|
||||
|
||||
%if %{with_sage_pexpect}
|
||||
rm -f %{buildroot}%{python_sitearch}/{ANSI,FSM,pexpect,pxssh,screen}.py{,c}
|
||||
%endif
|
||||
|
||||
%if %{with_sphinx_hack}
|
||||
rm -fr %{buildroot}%{python_sitearch}/sphinx
|
||||
|
|
@ -1052,16 +1048,15 @@ perl -pi -e 's|%{buildroot}||g;s|^##||g;' %{buildroot}%{_bindir}/sage
|
|||
|
||||
# More wrong buildroot references
|
||||
perl -pi -e 's|%{buildroot}||g;' \
|
||||
-e "s|$PWD/spkg/build/sage-%{version}/doc|%{SAGE_DOC}|g;" \
|
||||
%{buildroot}%{SAGE_DOC}/output/html/en/reference/todolist.html \
|
||||
%{buildroot}%{SAGE_DOC}/output/html/en/reference/misc/sage/misc/hg.html
|
||||
-e "s|$PWD/src/doc|%{SAGE_DOC}|g;" \
|
||||
%{buildroot}%{SAGE_DOC}/output/html/en/reference/todolist.html
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
# Fix links
|
||||
rm -fr $SAGE_SRC/sage $SAGE_EXTCODE/sage $SAGE_ROOT/doc $SAGE_SRC/doc
|
||||
rm -fr $SAGE_SRC/sage $SAGE_ETC/sage $SAGE_ROOT/doc $SAGE_SRC/doc
|
||||
rm -fr $SAGE_ROOT/share $SAGE_ROOT/devel
|
||||
ln -sf %{python_sitearch}/sage $SAGE_SRC/sage
|
||||
ln -sf %{python_sitearch} $SAGE_EXTCODE/sage
|
||||
ln -sf %{python_sitearch} $SAGE_ETC/sage
|
||||
ln -sf %{SAGE_DOC} $SAGE_ROOT/doc
|
||||
ln -sf %{SAGE_DOC} $SAGE_SRC/doc
|
||||
ln -sf %{SAGE_SHARE} $SAGE_ROOT/share
|
||||
|
|
@ -1069,7 +1064,7 @@ ln -sf %{SAGE_SHARE} $SAGE_ROOT/share
|
|||
ln -sf src $SAGE_ROOT/devel
|
||||
|
||||
# Install menu and icons
|
||||
pushd spkg/build/%{sagenb_pkg}/src/sagenb/sagenb/data
|
||||
pushd build/pkgs/sagenb/src/%{sagenb_pkg}/sagenb/data
|
||||
install -p -m644 -D sage/images/icon32x32.png %{buildroot}%{_datadir}/pixmaps/%{name}.png
|
||||
popd
|
||||
mkdir -p %{buildroot}%{_datadir}/applications
|
||||
|
|
@ -1176,10 +1171,8 @@ exit 0
|
|||
%{SAGE_SRC}/doc
|
||||
%{SAGE_SRC}/sage
|
||||
%dir %{SAGE_PYTHONPATH}
|
||||
%if %{with_sage_pexpect}
|
||||
# MIT
|
||||
%{SAGE_PYTHONPATH}/*.py*
|
||||
%endif
|
||||
# GPLv2+
|
||||
%{_bindir}/sage
|
||||
%{_datadir}/pixmaps/%{name}.png
|
||||
|
|
@ -1195,8 +1188,9 @@ exit 0
|
|||
#------------------------------------------------------------------------
|
||||
%files data
|
||||
%dir %{SAGE_SHARE}
|
||||
%dir %{SAGE_EXTCODE}
|
||||
%{SAGE_EXTCODE}/sage
|
||||
%dir %{SAGE_ETC}
|
||||
%{SAGE_ETC}/sage
|
||||
%{SAGE_ETC}/gprc.expect
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
%files data-conway_polynomials
|
||||
|
|
@ -1210,15 +1204,15 @@ exit 0
|
|||
%{SAGE_SHARE}/ellcurves
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
%files data-extcode
|
||||
%files data-etc
|
||||
# GPLv2+
|
||||
%{SAGE_EXTCODE}/gap
|
||||
%{SAGE_EXTCODE}/images
|
||||
%{SAGE_EXTCODE}/magma
|
||||
%{SAGE_EXTCODE}/maxima
|
||||
%{SAGE_EXTCODE}/mwrank
|
||||
%{SAGE_EXTCODE}/pari
|
||||
%{SAGE_EXTCODE}/singular
|
||||
%{SAGE_ETC}/gap
|
||||
%{SAGE_ETC}/images
|
||||
%{SAGE_ETC}/magma
|
||||
%{SAGE_ETC}/maxima
|
||||
%{SAGE_ETC}/mwrank
|
||||
%{SAGE_ETC}/pari
|
||||
%{SAGE_ETC}/singular
|
||||
|
||||
#------------------------------------------------------------------------
|
||||
%files data-graphs
|
||||
|
|
@ -1366,6 +1360,9 @@ exit 0
|
|||
|
||||
########################################################################
|
||||
%changelog
|
||||
* Fri Feb 7 2014 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 6.1.1-1
|
||||
- Update to sagemath 6.1.1
|
||||
|
||||
* Tue Jan 28 2014 pcpa <paulo.cesar.pereira.de.andrade@gmail.com> - 5.13-1
|
||||
- Update to sagemath 5.13
|
||||
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue