Update to sagemath 6.8

This commit is contained in:
pcpa 2015-12-22 12:50:40 -02:00
parent b4699213da
commit 3aa9b0c734
32 changed files with 806 additions and 615 deletions

View file

@ -1,6 +1,6 @@
diff -up src/doc/common/builder.py.orig src/doc/common/builder.py
--- src/doc/common/builder.py.orig 2015-04-03 14:56:53.775377558 -0300
+++ src/doc/common/builder.py 2015-04-03 14:56:58.208377728 -0300
--- src/doc/common/builder.py.orig 2015-12-22 10:55:07.586513923 -0200
+++ src/doc/common/builder.py 2015-12-22 10:55:10.131514020 -0200
@@ -32,7 +32,7 @@ from sage.env import SAGE_DOC, SAGE_SRC
# SAGE_DOC, LANGUAGES, SPHINXOPTS, PAPER, OMIT,
# PAPEROPTS, ALLSPHINXOPTS, NUM_THREADS, WEBSITESPHINXOPTS
@ -10,9 +10,39 @@ diff -up src/doc/common/builder.py.orig src/doc/common/builder.py
exec(compile(open(fpath).read(), fpath, 'exec'))
@@ -303,12 +303,12 @@ class AllBuilder(object):
# apply_async does not, so don't use it.
x = pool.map_async(build_other_doc, L, 1)
try:
- x.get(99999)
+ x.get(3600)
pool.close()
pool.join()
except Exception:
- pool.terminate()
if ABORT_ON_ERROR:
+ pool.terminate()
raise
logger.warning("Elapsed time: %.1f seconds."%(time.time()-start))
logger.warning("Done building the documentation!")
@@ -500,12 +500,12 @@ class ReferenceBuilder(AllBuilder):
# (See comment in AllBuilder._wrapper about using map instead of apply.)
x = pool.map_async(build_ref_doc, L, 1)
try:
- x.get(99999)
+ x.get(3600)
pool.close()
pool.join()
except Exception:
- pool.terminate()
if ABORT_ON_ERROR:
+ pool.terminate()
raise
# The html refman must be build at the end to ensure correct
# merging of indexes and inventories.
diff -up src/doc/common/conf.py.orig src/doc/common/conf.py
--- src/doc/common/conf.py.orig 2015-04-03 14:56:53.777377558 -0300
+++ src/doc/common/conf.py 2015-04-03 14:56:58.208377728 -0300
--- src/doc/common/conf.py.orig 2015-12-22 10:55:07.588513923 -0200
+++ src/doc/common/conf.py 2015-12-22 10:55:10.132514020 -0200
@@ -1,5 +1,5 @@
import sys, os, sphinx
-from sage.env import SAGE_DOC
@ -20,7 +50,7 @@ diff -up src/doc/common/conf.py.orig src/doc/common/conf.py
from datetime import date
def get_doc_abspath(path):
@@ -203,8 +203,7 @@ if (os.environ.get('SAGE_DOC_MATHJAX', '
@@ -224,8 +224,7 @@ if (os.environ.get('SAGE_DOC_MATHJAX', '
from sage.misc.latex_macros import sage_mathjax_macros
html_theme_options['mathjax_macros'] = sage_mathjax_macros()
@ -30,10 +60,27 @@ diff -up src/doc/common/conf.py.orig src/doc/common/conf.py
mathjax_relative = os.path.join('sagenb','data','mathjax')
# It would be really nice if sphinx would copy the entire mathjax directory,
diff -up src/doc/common/multidocs.py.orig src/doc/common/multidocs.py
--- src/doc/common/multidocs.py.orig 2015-12-22 10:55:07.591513923 -0200
+++ src/doc/common/multidocs.py 2015-12-22 10:55:10.132514020 -0200
@@ -73,8 +73,11 @@ def merge_environment(app, env):
for ind in newalldoc:
# treat subdocument source as orphaned file and don't complain
md = env.metadata.get(ind, set())
- md.add('orphan')
- env.metadata[ind] = md
+ try:
+ md.add('orphan')
+ env.metadata[ind] = md
+ except AttributeError:
+ env.metadata[ind] = {'orphan'}
# merge the citations
newcite = {}
for ind, (path, tag) in docenv.citations.iteritems():
diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
--- src/sage/doctest/control.py.orig 2015-04-03 14:56:32.065376727 -0300
+++ src/sage/doctest/control.py 2015-04-03 14:56:58.209377728 -0300
@@ -89,7 +89,6 @@ class DocTestDefaults(SageObject):
--- src/sage/doctest/control.py.orig 2015-12-22 10:55:07.592513923 -0200
+++ src/sage/doctest/control.py 2015-12-22 10:55:27.152514672 -0200
@@ -90,7 +90,6 @@ class DocTestDefaults(SageObject):
self.valgrind = False
self.massif = False
self.cachegrind = False
@ -41,7 +88,7 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
self.failed = False
self.new = False
self.show_skipped = False
@@ -211,7 +210,7 @@ class DocTestController(SageObject):
@@ -212,7 +211,7 @@ class DocTestController(SageObject):
if options.gdb or options.debug:
# Interactive debuggers: "infinite" timeout
options.timeout = 0
@ -50,7 +97,15 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
# Non-interactive debuggers: 48 hours
options.timeout = int(os.getenv('SAGE_TIMEOUT_VALGRIND', 48 * 60 * 60))
elif options.long:
@@ -890,13 +889,8 @@ class DocTestController(SageObject):
@@ -545,7 +544,6 @@ class DocTestController(SageObject):
def all_files():
from glob import glob
self.files.append(opj(SAGE_SRC, 'sage'))
- self.files.append(opj(SAGE_SRC, 'sage_setup'))
self.files.append(opj(SAGE_SRC, 'doc', 'common'))
self.files.extend(glob(opj(SAGE_SRC, 'doc', '[a-z][a-z]')))
self.options.sagenb = True
@@ -940,13 +938,8 @@ class DocTestController(SageObject):
elif opt.cachegrind:
toolname = "cachegrind"
flags = os.getenv("SAGE_CACHEGRIND_FLAGS", "")
@ -64,7 +119,7 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
if "%s" in flags:
flags %= toolname + ".%p" # replace %s with toolname
cmd += flags + sage_cmd
@@ -956,10 +950,10 @@ class DocTestController(SageObject):
@@ -1006,10 +999,10 @@ class DocTestController(SageObject):
0
"""
opt = self.options
@ -78,9 +133,9 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
return self.run_val_gdb()
else:
diff -up src/sage/interfaces/singular.py.orig src/sage/interfaces/singular.py
--- src/sage/interfaces/singular.py.orig 2015-04-03 14:56:32.066376727 -0300
+++ src/sage/interfaces/singular.py 2015-04-03 14:56:58.210377728 -0300
@@ -2149,7 +2149,7 @@ def generate_docstring_dictionary():
--- src/sage/interfaces/singular.py.orig 2015-12-22 10:55:07.594513923 -0200
+++ src/sage/interfaces/singular.py 2015-12-22 10:55:10.134514020 -0200
@@ -2232,7 +2232,7 @@ def generate_docstring_dictionary():
nodes.clear()
node_names.clear()