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Update to sagemath 8.5.
Also: - Bundle ipython again; Fedora version is too far ahead. Also have to bundle prompt_toolkit since Fedora version is too far ahead of bundled ipython. - Drop LANGUAGES variable setting, now ignored by the sagemath build system. - Drop unused SAGE_CBLAS variable from /usr/bin/sage. - Do not force the C locale when launching sagemath. - Allow the user to override SAGE_DEBUG in /usr/bin/sage. - Add -ecm, -giac, and -latte patches to fix interactions with external tools. - Add -sigfpe patch from upstream.
This commit is contained in:
Jerry James
parent
eaa777c690
commit
55beead27c
31 changed files with 674 additions and 684 deletions
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@ -1,92 +1,7 @@
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--- build/pkgs/sagenb/src/sagenb/misc/sphinxify.py.orig 2018-10-25 14:14:33.031253545 -0600
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+++ build/pkgs/sagenb/src/sagenb/misc/sphinxify.py 2018-10-25 15:33:56.358876835 -0600
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@@ -133,7 +133,7 @@ def sphinxify(docstring, format='html'):
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# "/media/...path.../blah.png"
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# to
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# "/doc/static/reference/media/...path.../blah.png"
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- output = re.sub("""src=['"](/?\.\.)*/?media/([^"']*)['"]""",
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+ output = re.sub("""src=['"](/?\\.\\.)*/?media/([^"']*)['"]""",
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'src="/doc/static/reference/media/\\2"',
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output)
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# Remove spurious \(, \), \[, \].
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--- build/pkgs/sagenb/src/sagenb/misc/support.py.orig 2018-10-25 13:30:02.499892169 -0600
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+++ build/pkgs/sagenb/src/sagenb/misc/support.py 2018-10-25 14:14:33.032253542 -0600
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@@ -550,7 +550,7 @@ try:
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return args[0].__getattribute__(str(self))(*args[1:], **kwds)
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def automatic_name_eval(s, globals, max_names=10000):
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- """
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+ r"""
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Exec the string ``s`` in the scope of the ``globals``
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dictionary, and if any :exc:`NameError`\ s are raised, try to
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fix them by defining the variable that caused the error to be
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--- build/pkgs/sagenb/src/sagenb/notebook/cell.py.orig 2018-10-25 13:30:55.707737342 -0600
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+++ build/pkgs/sagenb/src/sagenb/notebook/cell.py 2018-10-25 14:14:33.032253542 -0600
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@@ -441,7 +441,7 @@ class Cell_generic(object):
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return isinstance(self, Cell)
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def is_auto_cell(self):
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- """
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+ r"""
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Returns whether this is an automatically evaluated generic
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cell. This is always false for :class:`Cell_generic`\ s and
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:class:`TextCell`\ s.
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@@ -647,7 +647,7 @@ class TextCell(Cell_generic):
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return self._text
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def set_cell_output_type(self, typ='wrap'):
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- """
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+ r"""
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Sets this text cell's output type. This does nothing for
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:class:`TextCell`\ s.
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@@ -1320,8 +1320,8 @@ class Cell(Cell_generic):
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if len(s) == 0:
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return False
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s = s[0]
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- return bool(re.search('(?<!\w)interact\s*\(.*\).*', s) or
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- re.search('\s*@\s*interact', s))
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+ return bool(re.search(r'(?<!\w)interact\s*\(.*\).*', s) or
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+ re.search(r'\s*@\s*interact', s))
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def is_interacting(self):
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r"""
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@@ -1344,7 +1344,7 @@ class Cell(Cell_generic):
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return hasattr(self, 'interact')
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def stop_interacting(self):
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- """
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+ r"""
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Stops :func:`sagenb.notebook.interact.interact`\ ion for this
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compute cell.
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--- build/pkgs/sagenb/src/sagenb/notebook/worksheet.py.orig 2018-05-22 10:01:48.000000000 -0600
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+++ build/pkgs/sagenb/src/sagenb/notebook/worksheet.py 2018-10-17 14:41:08.634154908 -0600
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@@ -61,8 +61,8 @@ from flask_babel import gettext, lazy_ge
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_ = gettext
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# Set some constants that will be used for regular expressions below.
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-whitespace = re.compile('\s') # Match any whitespace character
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-non_whitespace = re.compile('\S')
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+whitespace = re.compile(r'\s') # Match any whitespace character
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+non_whitespace = re.compile(r'\S')
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# The file to which the Sage code that will be evaluated is written.
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CODE_PY = "___code___.py"
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--- src/sage/combinat/cluster_algebra_quiver/quiver_mutation_type.py.orig 2018-10-17 17:13:35.000000000 -0600
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+++ src/sage/combinat/cluster_algebra_quiver/quiver_mutation_type.py 2018-10-25 14:14:33.033253539 -0600
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@@ -2023,7 +2023,7 @@ class QuiverMutationType_Reducible(Quive
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@cached_method
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def class_size(self):
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- """
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+ r"""
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If it is known, the size of the mutation class of all quivers
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which are mutation equivalent to the standard quiver of
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``self`` (up to isomorphism) is returned.
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--- src/sage/combinat/crystals/alcove_path.py.orig 2018-10-17 17:13:35.000000000 -0600
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+++ src/sage/combinat/crystals/alcove_path.py 2018-10-25 15:37:04.294360718 -0600
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@@ -389,7 +389,7 @@ class CrystalOfAlcovePaths(UniqueReprese
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diff -up src/sage/combinat/crystals/alcove_path.py.orig src/sage/combinat/crystals/alcove_path.py
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--- src/sage/combinat/crystals/alcove_path.py.orig 2018-12-22 16:37:07.000000000 -0700
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+++ src/sage/combinat/crystals/alcove_path.py 2019-01-04 11:16:55.320833974 -0700
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@@ -383,7 +383,7 @@ class CrystalOfAlcovePaths(UniqueReprese
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One can compute all vertices of the crystal by finding all the
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admissible subsets of the `\lambda`-chain (see method
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@ -95,8 +10,9 @@
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search algorithm.
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.. WARNING::
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--- src/sage/homology/homology_group.py.orig 2018-10-17 17:13:47.000000000 -0600
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+++ src/sage/homology/homology_group.py 2018-10-25 15:54:54.683421705 -0600
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diff -up src/sage/homology/homology_group.py.orig src/sage/homology/homology_group.py
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--- src/sage/homology/homology_group.py.orig 2018-12-22 16:37:08.000000000 -0700
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+++ src/sage/homology/homology_group.py 2019-01-04 11:17:37.136047323 -0700
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@@ -109,7 +109,7 @@ class HomologyGroup_class(AdditiveAbelia
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sage: from sage.homology.homology_group import HomologyGroup
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sage: H = HomologyGroup(7, ZZ, [4,4,4,4,4,7,7])
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@ -106,3 +22,15 @@
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sage: latex(HomologyGroup(6, ZZ))
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\ZZ^{6}
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"""
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diff -up src/sage/rings/number_field/number_field.py.orig src/sage/rings/number_field/number_field.py
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--- src/sage/rings/number_field/number_field.py.orig 2018-12-22 16:37:10.000000000 -0700
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+++ src/sage/rings/number_field/number_field.py 2019-01-08 16:25:39.730547708 -0700
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@@ -6613,7 +6613,7 @@ class NumberField_generic(WithEqualityBy
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return U
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def S_unit_solutions(self, S=[], prec=106, include_exponents=False, include_bound=False, proof=None):
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- """
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+ r"""
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Return all solutions to the S-unit equation ``x + y = 1`` over K.
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INPUT:
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