Update to latest upstream release

sagemath-includes.patch

@@ -1,6 +1,6 @@
 diff -up src/module_list.py.orig src/module_list.py
---- src/module_list.py.orig	2019-09-11 08:52:38.084040542 -0600
-+++ src/module_list.py	2019-09-11 09:03:51.394981074 -0600
+--- src/module_list.py.orig	2019-10-03 16:21:27.371721895 -0300
++++ src/module_list.py	2019-10-03 16:28:36.076432442 -0300
 @@ -44,6 +44,9 @@ zlib_libs = zlib_pc['libraries']
  zlib_library_dirs = zlib_pc['library_dirs']
  zlib_include_dirs = zlib_pc['include_dirs']
@@ -26,7 +26,7 @@ diff -up src/module_list.py.orig src/module_list.py
  ### Library order
  #########################################################
  
-@@ -133,7 +144,8 @@ ext_modules = [
+@@ -134,7 +145,8 @@ ext_modules = [
                 language='c++',
                 libraries = ["gmp", "m", "ntl"]),
  
@@ -36,7 +36,7 @@ diff -up src/module_list.py.orig src/module_list.py
  
      Extension('*', sources = ['sage/algebras/finite_dimensional_algebras/*.pyx']),
  
-@@ -522,7 +534,8 @@ ext_modules = [
+@@ -558,7 +570,8 @@ ext_modules = [
                                                          [])),
  
      Extension('sage.libs.lrcalc.lrcalc',
@@ -46,7 +46,7 @@ diff -up src/module_list.py.orig src/module_list.py
  
  #    OptionalExtension("sage.libs.meataxe",
  #              sources = ['sage/libs/meataxe.pyx'],
-@@ -544,23 +557,28 @@ ext_modules = [
+@@ -580,23 +593,28 @@ ext_modules = [
                sources = ['sage/libs/readline.pyx'],
                libraries = ['readline']),
  
@@ -80,7 +80,7 @@ diff -up src/module_list.py.orig src/module_list.py
  
      ###################################
      ##
-@@ -568,7 +586,8 @@ ext_modules = [
+@@ -604,7 +622,8 @@ ext_modules = [
      ##
      ###################################
  
@@ -90,17 +90,17 @@ diff -up src/module_list.py.orig src/module_list.py
  
      ###################################
      ##
-@@ -740,7 +759,8 @@ ext_modules = [
+@@ -776,7 +795,8 @@ ext_modules = [
  
      Extension("sage.matrix.matrix_complex_ball_dense",
                ["sage/matrix/matrix_complex_ball_dense.pyx"],
--              libraries=['arb']),
+-              libraries=[arb_dylib_name]),
 +              include_dirs = arb_include_dirs,
 +              libraries=arb_libs),
  
      Extension('sage.matrix.matrix_complex_double_dense',
                sources = ['sage/matrix/matrix_complex_double_dense.pyx']),
-@@ -748,6 +768,7 @@ ext_modules = [
+@@ -784,6 +804,7 @@ ext_modules = [
      Extension('sage.matrix.matrix_cyclo_dense',
                sources = ['sage/matrix/matrix_cyclo_dense.pyx'],
                language = "c++",
@@ -108,7 +108,7 @@ diff -up src/module_list.py.orig src/module_list.py
                libraries=['ntl']),
  
      Extension('sage.matrix.matrix_gap',
-@@ -810,6 +831,7 @@ ext_modules = [
+@@ -844,6 +865,7 @@ ext_modules = [
                sources = ['sage/matrix/matrix_modn_sparse.pyx']),
  
      Extension('sage.matrix.matrix_mpolynomial_dense',
@@ -116,7 +116,7 @@ diff -up src/module_list.py.orig src/module_list.py
                sources = ['sage/matrix/matrix_mpolynomial_dense.pyx']),
  
      Extension('sage.matrix.matrix_polynomial_dense',
-@@ -1099,7 +1121,8 @@ ext_modules = [
+@@ -1131,7 +1153,8 @@ ext_modules = [
                language = 'c++'),
  
      Extension("sage.rings.complex_arb",
@@ -126,7 +126,7 @@ diff -up src/module_list.py.orig src/module_list.py
  
      Extension('sage.rings.complex_double',
                sources = ['sage/rings/complex_double.pyx'],
-@@ -1175,7 +1198,8 @@ ext_modules = [
+@@ -1207,7 +1230,8 @@ ext_modules = [
                sources = ['sage/rings/real_interval_absolute.pyx']),
  
      Extension("sage.rings.real_arb",
@@ -136,7 +136,7 @@ diff -up src/module_list.py.orig src/module_list.py
  
      Extension('sage.rings.real_lazy',
                sources = ['sage/rings/real_lazy.pyx']),
-@@ -1258,6 +1282,7 @@ ext_modules = [
+@@ -1290,6 +1314,7 @@ ext_modules = [
  
      Extension('sage.rings.number_field.number_field_element_quadratic',
                sources = ['sage/rings/number_field/number_field_element_quadratic.pyx'],
@@ -144,7 +144,7 @@ diff -up src/module_list.py.orig src/module_list.py
                libraries=['ntl'],
                language = 'c++'),
  
-@@ -1397,12 +1422,15 @@ ext_modules = [
+@@ -1429,12 +1454,15 @@ ext_modules = [
                sources = ['sage/rings/polynomial/multi_polynomial.pyx']),
  
      Extension('sage.rings.polynomial.multi_polynomial_ideal_libsingular',
@@ -160,7 +160,7 @@ diff -up src/module_list.py.orig src/module_list.py
                sources = ['sage/rings/polynomial/multi_polynomial_libsingular.pyx']),
  
      Extension('sage.rings.polynomial.multi_polynomial_ring_base',
-@@ -1415,7 +1443,8 @@ ext_modules = [
+@@ -1447,7 +1475,8 @@ ext_modules = [
                sources = ['sage/rings/polynomial/polydict.pyx']),
  
      Extension('sage.rings.polynomial.polynomial_complex_arb',
@@ -171,8 +171,8 @@ diff -up src/module_list.py.orig src/module_list.py
      Extension('sage.rings.polynomial.polynomial_compiled',
                 sources = ['sage/rings/polynomial/polynomial_compiled.pyx']),
 diff -up src/setup.py.orig src/setup.py
---- src/setup.py.orig	2019-09-11 08:51:46.080885941 -0600
-+++ src/setup.py	2019-09-11 09:03:51.394981074 -0600
+--- src/setup.py.orig	2019-10-03 16:28:47.206502813 -0300
++++ src/setup.py	2019-10-03 16:29:08.059634660 -0300
 @@ -85,6 +85,7 @@ keep_going = False
  
  # search for dependencies and add to gcc -I<path>