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Update to sagemath 8.0

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pcpa 2017-11-10 11:26:56 -05:00
parent b78abd5373
commit abc6d11c12
27 changed files with 290 additions and 655 deletions
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34
sagemath-sagedoc.patch
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@ -1,6 +1,6 @@
diff -up src/doc/common/conf.py.orig src/doc/common/conf.py
--- src/doc/common/conf.py.orig 2017-04-11 09:55:23.607260518 -0400
+++ src/doc/common/conf.py 2017-04-11 09:55:52.327261618 -0400
--- src/doc/common/conf.py.orig 2017-11-08 08:08:07.554172292 -0500
+++ src/doc/common/conf.py 2017-11-08 08:08:33.656173291 -0500
@@ -220,7 +220,7 @@ if (os.environ.get('SAGE_DOC_MATHJAX', '
html_theme_options['mathjax_macros'] = sage_mathjax_macros()
@ -11,9 +11,9 @@ diff -up src/doc/common/conf.py.orig src/doc/common/conf.py
# It would be really nice if sphinx would copy the entire mathjax directory,
diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
--- src/sage/doctest/control.py.orig 2017-04-11 09:55:23.610260518 -0400
+++ src/sage/doctest/control.py 2017-04-11 09:55:52.330261618 -0400
@@ -95,7 +95,6 @@ class DocTestDefaults(SageObject):
--- src/sage/doctest/control.py.orig 2017-11-08 08:08:44.186173695 -0500
+++ src/sage/doctest/control.py 2017-11-08 08:09:24.904175254 -0500
@@ -96,7 +96,6 @@ class DocTestDefaults(SageObject):
self.valgrind = False
self.massif = False
self.cachegrind = False
@ -21,7 +21,7 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
self.failed = False
self.new = False
self.show_skipped = False
@@ -270,7 +269,7 @@ class DocTestController(SageObject):
@@ -285,7 +284,7 @@ class DocTestController(SageObject):
if options.gdb or options.debug:
# Interactive debuggers: "infinite" timeout
options.timeout = 0
@ -30,7 +30,7 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
# Non-interactive debuggers: 48 hours
options.timeout = int(os.getenv('SAGE_TIMEOUT_VALGRIND', 48 * 60 * 60))
elif options.long:
@@ -1034,13 +1033,8 @@ class DocTestController(SageObject):
@@ -1049,13 +1048,8 @@ class DocTestController(SageObject):
elif opt.cachegrind:
toolname = "cachegrind"
flags = os.getenv("SAGE_CACHEGRIND_FLAGS", "")
@ -44,7 +44,7 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
if "%s" in flags:
flags %= toolname + ".%p" # replace %s with toolname
cmd += flags + sage_cmd
@@ -1100,10 +1094,10 @@ class DocTestController(SageObject):
@@ -1115,10 +1109,10 @@ class DocTestController(SageObject):
0
"""
opt = self.options
@ -58,9 +58,9 @@ diff -up src/sage/doctest/control.py.orig src/sage/doctest/control.py
return self.run_val_gdb()
else:
diff -up src/sage/interfaces/singular.py.orig src/sage/interfaces/singular.py
--- src/sage/interfaces/singular.py.orig 2017-04-11 09:55:50.260261539 -0400
+++ src/sage/interfaces/singular.py 2017-04-11 09:55:52.332261618 -0400
@@ -2291,7 +2291,7 @@ def generate_docstring_dictionary():
--- src/sage/interfaces/singular.py.orig 2017-11-08 08:09:36.306175691 -0500
+++ src/sage/interfaces/singular.py 2017-11-08 08:09:57.144176489 -0500
@@ -2287,7 +2287,7 @@ def generate_docstring_dictionary():
nodes.clear()
node_names.clear()
@ -70,9 +70,9 @@ diff -up src/sage/interfaces/singular.py.orig src/sage/interfaces/singular.py
new_node = re.compile("File: singular\.hlp, Node: ([^,]*),.*")
new_lookup = re.compile("\* ([^:]*):*([^.]*)\..*")
diff -up src/sage_setup/docbuild/ext/multidocs.py.orig src/sage_setup/docbuild/ext/multidocs.py
--- src/sage_setup/docbuild/ext/multidocs.py.orig 2017-04-11 09:55:23.612260518 -0400
+++ src/sage_setup/docbuild/ext/multidocs.py 2017-04-11 09:55:52.332261618 -0400
@@ -84,8 +84,11 @@ def merge_environment(app, env):
--- src/sage_setup/docbuild/ext/multidocs.py.orig 2017-11-08 08:10:07.010176866 -0500
+++ src/sage_setup/docbuild/ext/multidocs.py 2017-11-08 08:10:30.319177759 -0500
@@ -82,8 +82,11 @@ def merge_environment(app, env):
for ind in newalldoc:
# treat subdocument source as orphaned file and don't complain
md = env.metadata.get(ind, dict())
@ -85,10 +85,10 @@ diff -up src/sage_setup/docbuild/ext/multidocs.py.orig src/sage_setup/docbuild/e
+ env.metadata[ind] = {'orphan'}
# merge the citations
newcite = {}
for ind, (path, tag) in six.iteritems(docenv.citations):
for ind, (path, tag) in six.iteritems(docenv.domaindata["std"]["citations"]):
diff -up src/sage_setup/docbuild/__init__.py.orig src/sage_setup/docbuild/__init__.py
--- src/sage_setup/docbuild/__init__.py.orig 2017-04-11 09:55:50.272261539 -0400
+++ src/sage_setup/docbuild/__init__.py 2017-04-11 09:55:52.333261618 -0400
--- src/sage_setup/docbuild/__init__.py.orig 2017-11-08 08:10:41.962178205 -0500
+++ src/sage_setup/docbuild/__init__.py 2017-11-08 08:11:16.448179525 -0500
@@ -248,13 +248,14 @@ if NUM_THREADS > 1:
# map_async handles KeyboardInterrupt correctly. Plain map and
# apply_async does not, so don't use it.