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Version 9.6

Browse source 
- Fix path to libSingular.so (bz 2073208)
- Fix threejs install location (bz 2081720)
- Drop upstreamed -rubiks and -intersphinx-disabled-reftypes patches
- Drop no longer used ratpoints BR
- Thebe is no longer bundled
This commit is contained in:
Jerry James 2022-06-07 09:24:36 -06:00
parent 33af71616a
commit aed4db5045
10 changed files with 300 additions and 646 deletions
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92
sagemath-python3.patch
View file

@ -1,6 +1,6 @@
diff -up src/sage/cpython/debugimpl.c.orig src/sage/cpython/debugimpl.c
--- src/sage/cpython/debugimpl.c.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/cpython/debugimpl.c 2022-03-04 16:16:45.900676037 -0700
--- src/sage/cpython/debugimpl.c.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/cpython/debugimpl.c 2022-06-01 10:53:46.037463665 -0600
@@ -148,6 +148,7 @@ static void _type_debug(PyTypeObject* tp
printf(" tp_basicsize: %ld\n", (long)tp->tp_basicsize);
printf(" tp_itemsize: %ld\n", (long)tp->tp_itemsize);
@ -18,8 +18,8 @@ diff -up src/sage/cpython/debugimpl.c.orig src/sage/cpython/debugimpl.c
attr_pointer_meth(tp_call, "__call__");
attr_pointer_meth(tp_str, "__str__");
diff -up src/sage/cpython/debug.pyx.orig src/sage/cpython/debug.pyx
--- src/sage/cpython/debug.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/cpython/debug.pyx 2022-03-04 16:16:45.900676037 -0700
--- src/sage/cpython/debug.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/cpython/debug.pyx 2022-06-01 10:53:46.037463665 -0600
@@ -231,6 +231,7 @@ def type_debug(cls):
tp_basicsize: 16
tp_itemsize: 0
@ -37,9 +37,9 @@ diff -up src/sage/cpython/debug.pyx.orig src/sage/cpython/debug.pyx
tp_call (__call__): NULL
tp_str (__str__): 0x7fc57d757020
diff -up src/sage/geometry/triangulation/point_configuration.py.orig src/sage/geometry/triangulation/point_configuration.py
--- src/sage/geometry/triangulation/point_configuration.py.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/geometry/triangulation/point_configuration.py 2022-03-04 16:16:45.901676039 -0700
@@ -619,11 +619,11 @@ class PointConfiguration(UniqueRepresent
--- src/sage/geometry/triangulation/point_configuration.py.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/geometry/triangulation/point_configuration.py 2022-06-01 10:53:46.038463669 -0600
@@ -618,11 +618,11 @@ class PointConfiguration(UniqueRepresent
['{{0,1,2,4},{1,2,3,4}}']
"""
timeout = 600
@ -54,8 +54,8 @@ diff -up src/sage/geometry/triangulation/point_configuration.py.orig src/sage/ge
if verbose:
print("#### TOPCOM input ####")
diff -up src/sage/interfaces/frobby.py.orig src/sage/interfaces/frobby.py
--- src/sage/interfaces/frobby.py.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/interfaces/frobby.py 2022-03-04 16:16:45.901676039 -0700
--- src/sage/interfaces/frobby.py.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/interfaces/frobby.py 2022-06-01 10:53:46.038463669 -0600
@@ -78,7 +78,7 @@ class Frobby:
print("Frobby command: ", repr(command))
print("Frobby input:\n", input)
@ -66,21 +66,21 @@ diff -up src/sage/interfaces/frobby.py.orig src/sage/interfaces/frobby.py
frinput = str_to_bytes(input)
else:
diff -up src/sage/interfaces/gfan.py.orig src/sage/interfaces/gfan.py
--- src/sage/interfaces/gfan.py.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/interfaces/gfan.py 2022-03-04 16:16:45.901676039 -0700
@@ -61,7 +61,7 @@ class Gfan(object):
print("gfan input:\n%s" % I)
--- src/sage/interfaces/gfan.py.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/interfaces/gfan.py 2022-06-01 10:56:40.784198738 -0600
@@ -109,7 +109,7 @@ class Gfan(object):
print("gfan input:\n%s" % input)
gfan_processes = Popen(cmd, stdin=PIPE, stdout=PIPE, stderr=PIPE,
- encoding='latin-1')
+ encoding='utf-8')
ans, err = gfan_processes.communicate(input=I)
ans, err = gfan_processes.communicate(input=input)
# sometimes, gfan outputs stuff to stderr even though everything is fine
diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
--- src/sage/interfaces/latte.py.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/interfaces/latte.py 2022-03-04 16:16:45.901676039 -0700
@@ -162,6 +162,7 @@ def count(arg, ehrhart_polynomial=False,
--- src/sage/interfaces/latte.py.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/interfaces/latte.py 2022-06-01 10:53:46.039463674 -0600
@@ -159,6 +159,7 @@ def count(arg, ehrhart_polynomial=False,
latte_proc = Popen(args,
stdin=PIPE, stdout=PIPE,
stderr=(None if verbose else PIPE),
@ -88,7 +88,7 @@ diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
cwd=str(SAGE_TMP))
ans, err = latte_proc.communicate(arg)
@@ -385,6 +386,7 @@ def integrate(arg, polynomial=None, algo
@@ -379,6 +380,7 @@ def integrate(arg, polynomial=None, algo
latte_proc = Popen(args,
stdin=PIPE, stdout=PIPE,
stderr=(None if verbose else PIPE),
@ -97,8 +97,8 @@ diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
ans, err = latte_proc.communicate(arg)
diff -up src/sage/interfaces/sagespawn.pyx.orig src/sage/interfaces/sagespawn.pyx
--- src/sage/interfaces/sagespawn.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/interfaces/sagespawn.pyx 2022-03-04 16:16:45.902676041 -0700
--- src/sage/interfaces/sagespawn.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/interfaces/sagespawn.pyx 2022-06-01 10:53:46.039463674 -0600
@@ -1,6 +1,6 @@
"""
Sage wrapper around pexpect's ``spawn`` class and
@ -147,8 +147,8 @@ diff -up src/sage/interfaces/sagespawn.pyx.orig src/sage/interfaces/sagespawn.py
pass
self.fileobj.close()
diff -up src/sage/libs/coxeter3/coxeter.pyx.orig src/sage/libs/coxeter3/coxeter.pyx
--- src/sage/libs/coxeter3/coxeter.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/libs/coxeter3/coxeter.pyx 2022-03-04 16:16:45.902676041 -0700
--- src/sage/libs/coxeter3/coxeter.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/libs/coxeter3/coxeter.pyx 2022-06-01 10:53:46.039463674 -0600
@@ -37,7 +37,7 @@ cdef class String:
EXAMPLES::
@ -282,9 +282,9 @@ diff -up src/sage/libs/coxeter3/coxeter.pyx.orig src/sage/libs/coxeter3/coxeter.
if rank == 0:
raise NotImplementedError("Coxeter group of type ['A',0] using Coxeter 3 not yet implemented")
diff -up src/sage/misc/sageinspect.py.orig src/sage/misc/sageinspect.py
--- src/sage/misc/sageinspect.py.orig 2022-03-04 15:50:57.336269352 -0700
+++ src/sage/misc/sageinspect.py 2022-03-04 16:19:08.779910689 -0700
@@ -504,12 +504,9 @@ class SageArgSpecVisitor(ast.NodeVisitor
--- src/sage/misc/sageinspect.py.orig 2022-06-01 10:29:22.938310306 -0600
+++ src/sage/misc/sageinspect.py 2022-06-01 10:53:46.040463678 -0600
@@ -505,12 +505,9 @@ class SageArgSpecVisitor(ast.NodeVisitor
"""
return node.id
@ -300,7 +300,7 @@ diff -up src/sage/misc/sageinspect.py.orig src/sage/misc/sageinspect.py
INPUT:
@@ -523,7 +520,7 @@ class SageArgSpecVisitor(ast.NodeVisitor
@@ -524,7 +521,7 @@ class SageArgSpecVisitor(ast.NodeVisitor
sage: import ast, sage.misc.sageinspect as sms
sage: visitor = sms.SageArgSpecVisitor()
@ -310,9 +310,9 @@ diff -up src/sage/misc/sageinspect.py.orig src/sage/misc/sageinspect.py
[True, False, None]
sage: [type(vis(n)) for n in ['True', 'False', 'None']]
diff -up src/sage/plot/plot3d/plot3d.py.orig src/sage/plot/plot3d/plot3d.py
--- src/sage/plot/plot3d/plot3d.py.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/plot/plot3d/plot3d.py 2022-03-06 19:41:13.399013881 -0700
@@ -148,6 +148,7 @@ from .shapes import arrow3d
--- src/sage/plot/plot3d/plot3d.py.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/plot/plot3d/plot3d.py 2022-06-01 10:53:46.040463678 -0600
@@ -219,6 +219,7 @@ from .shapes import arrow3d
from .base import Graphics3dGroup
from sage.plot.colors import rainbow
from .texture import Texture
@ -320,7 +320,7 @@ diff -up src/sage/plot/plot3d/plot3d.py.orig src/sage/plot/plot3d/plot3d.py
from sage.functions.trig import cos, sin
from sage.misc.sageinspect import sage_getargspec, is_function_or_cython_function
@@ -182,7 +183,7 @@ class _Coordinates(object):
@@ -255,7 +256,7 @@ class _Coordinates(object):
sage: arb((x+z,y*z,z), z, (x,y))
Arbitrary Coordinates coordinate transform (z in terms of x, y)
"""
@ -330,9 +330,9 @@ diff -up src/sage/plot/plot3d/plot3d.py.orig src/sage/plot/plot3d/plot3d.py
raise ValueError('variables were specified incorrectly for this coordinate system; incorrect variables were %s'%list(set(all_vars).symmetric_difference(set(indep_vars+[dep_var]))))
self.dep_var = dep_var
diff -up src/sage/rings/integer.pyx.orig src/sage/rings/integer.pyx
--- src/sage/rings/integer.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/rings/integer.pyx 2022-03-04 16:16:45.904676044 -0700
@@ -7023,7 +7023,7 @@ cdef int mpz_set_str_python(mpz_ptr z, c
--- src/sage/rings/integer.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/rings/integer.pyx 2022-06-01 10:53:46.041463682 -0600
@@ -7069,7 +7069,7 @@ cdef int mpz_set_str_python(mpz_ptr z, c
x += 1 # Strip spaces
# Disallow a sign here
@ -342,8 +342,8 @@ diff -up src/sage/rings/integer.pyx.orig src/sage/rings/integer.pyx
assert base >= 2
diff -up src/sage/rings/polynomial/pbori/pbori.pyx.orig src/sage/rings/polynomial/pbori/pbori.pyx
--- src/sage/rings/polynomial/pbori/pbori.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/rings/polynomial/pbori/pbori.pyx 2022-03-04 16:16:45.905676046 -0700
--- src/sage/rings/polynomial/pbori/pbori.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/rings/polynomial/pbori/pbori.pyx 2022-06-01 10:53:46.042463686 -0600
@@ -4730,8 +4730,7 @@ cdef class PolynomialConstruct:
# So, it is just a conversion. [Simon King]
return (<BooleanPolynomialRing>ring)._element_constructor_(x)
@ -355,8 +355,8 @@ diff -up src/sage/rings/polynomial/pbori/pbori.pyx.orig src/sage/rings/polynomia
cdef class MonomialConstruct:
diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
--- src/sage/rings/real_mpfi.pyx.orig 2022-03-04 15:50:57.348269369 -0700
+++ src/sage/rings/real_mpfi.pyx 2022-03-04 16:16:45.905676046 -0700
--- src/sage/rings/real_mpfi.pyx.orig 2022-06-01 10:29:27.588329956 -0600
+++ src/sage/rings/real_mpfi.pyx 2022-06-01 10:53:46.043463690 -0600
@@ -1943,12 +1943,12 @@ cdef class RealIntervalFieldElement(Ring
cdef long digits
@ -382,8 +382,8 @@ diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
mant_string = bytes_to_str(tmp_cstr+1)
sign_string = bytes_to_str(b'-')
diff -up src/sage/rings/real_mpfr.pyx.orig src/sage/rings/real_mpfr.pyx
--- src/sage/rings/real_mpfr.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/rings/real_mpfr.pyx 2022-03-04 16:16:45.906676047 -0700
--- src/sage/rings/real_mpfr.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/rings/real_mpfr.pyx 2022-06-01 10:53:46.043463690 -0600
@@ -2092,7 +2092,7 @@ cdef class RealNumber(sage.structure.ele
if s is NULL:
raise RuntimeError("unable to convert an mpfr number to a string")
@ -394,9 +394,9 @@ diff -up src/sage/rings/real_mpfr.pyx.orig src/sage/rings/real_mpfr.pyx
t = char_to_str(s + 1)
else:
diff -up src/sage/structure/sage_object.pyx.orig src/sage/structure/sage_object.pyx
--- src/sage/structure/sage_object.pyx.orig 2022-01-30 06:41:50.000000000 -0700
+++ src/sage/structure/sage_object.pyx 2022-03-04 16:16:45.906676047 -0700
@@ -690,7 +690,7 @@ cdef class SageObject:
--- src/sage/structure/sage_object.pyx.orig 2022-05-15 16:11:11.000000000 -0600
+++ src/sage/structure/sage_object.pyx 2022-06-01 10:53:46.044463695 -0600
@@ -691,7 +691,7 @@ cdef class SageObject:
try:
s = self._interface_init_(I)
except Exception:
@ -406,9 +406,9 @@ diff -up src/sage/structure/sage_object.pyx.orig src/sage/structure/sage_object.
if c:
try:
diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
--- src/sage/symbolic/expression.pyx.orig 2022-03-04 16:01:04.179126250 -0700
+++ src/sage/symbolic/expression.pyx 2022-03-04 16:16:45.908676050 -0700
@@ -14016,7 +14016,7 @@ cdef class hold_class:
--- src/sage/symbolic/expression.pyx.orig 2022-06-01 10:29:28.934335645 -0600
+++ src/sage/symbolic/expression.pyx 2022-06-01 10:53:46.045463699 -0600
@@ -14072,7 +14072,7 @@ cdef class hold_class:
sage: SR(2)^5
32
"""
@ -417,7 +417,7 @@ diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
def __exit__(self, *args):
"""
@@ -14029,7 +14029,7 @@ cdef class hold_class:
@@ -14085,7 +14085,7 @@ cdef class hold_class:
sage: SR(2)^5
32
"""